dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003922_42|CGC1
Gene ID: MGYG000003922_02432
Location and strand information: 7769 - 9601 (-)
Family: 3.A.1.106.1
Protein type: TC
Protein description: Lipid A export ATP-binding/permease protein MsbA

Gene clsuter ID: MGYG000003922_42|CGC1
Gene ID: MGYG000003922_02433
Location and strand information: 9808 - 10647 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003922_42|CGC1
Gene ID: MGYG000003922_02434
Location and strand information: 10660 - 11598 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003922_42|CGC1
Gene ID: MGYG000003922_02435
Location and strand information: 11608 - 12507 (-)
Family: GT11
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.3382
Protein molecular weight: 34880.31
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003922_42|CGC1
Gene ID: MGYG000003922_02436
Location and strand information: 12526 - 13503 (-)
Family: GT2
Protein type: CAZyme
Protein description: Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
Protein isoelectric point: 6.6405
Protein molecular weight: 37489.73
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003922_42|CGC1
Gene ID: MGYG000003922_02437
Location and strand information: 13539 - 14729 (-)
Family: GT4
Protein type: CAZyme
Protein description: Glycosyltransferase Gtf1
Protein isoelectric point: 8.5182
Protein molecular weight: 46088.63
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003922_42|CGC1
Gene ID: MGYG000003922_02438
Location and strand information: 14811 - 15869 (+)
Family: GT4
Protein type: CAZyme
Protein description: D-inositol-3-phosphate glycosyltransferase
Protein isoelectric point: 9.2295
Protein molecular weight: 40999.48
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003922_42|CGC1
Gene ID: MGYG000003922_02439
Location and strand information: 15961 - 17022 (+)
Family: GT4
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.6642
Protein molecular weight: 41416.99
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003922_42|CGC1
Gene ID: MGYG000003922_02440
Location and strand information: 17533 - 19512 (+)
Family: 1.C.39.13.2
Protein type: TC
Protein description: hypothetical protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is capsule polysaccharide synthesis download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003922_02432	Lipid A export ATP-binding/permease protein MsbA	TC	7769	9601	-	3.A.1.106.1
MGYG000003922_02433	hypothetical protein	null	9808	10647	+	No domain
MGYG000003922_02434	hypothetical protein	null	10660	11598	+	Acyl_transf_3
MGYG000003922_02435	hypothetical protein	CAZyme	11608	12507	-	GT11
MGYG000003922_02436	Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	CAZyme	12526	13503	-	GT2
MGYG000003922_02437	Glycosyltransferase Gtf1	CAZyme	13539	14729	-	GT4
MGYG000003922_02438	D-inositol-3-phosphate glycosyltransferase	CAZyme	14811	15869	+	GT4
MGYG000003922_02439	hypothetical protein	CAZyme	15961	17022	+	GT4
MGYG000003922_02440	hypothetical protein	TC	17533	19512	+	1.C.39.13.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature